DNA Sequence Alignment Accelerator :: Overview
Project maintainers
Details
Name: seqalign
Created: Aug 17, 2009
Updated: Aug 17, 2009
SVN Updated: Aug 17, 2009
SVN: Browse
Latest version: download
Statistics: View
Other project properties
Category: Other
Language: Verilog
Development status: Alpha
Additional info:
none
WishBone Compliant: No
License: LGPL
Description
This is an easily configurable systolic array of processors to compute the optimal alignment between two DNA sequences. It supports affine gap penalties, and is configurable between local (smith-waterman) and global (needleman-wunsch) alignment algorithms by setting an internal register. All code is in Verilog.