| 1 |
700 |
jeremybenn |
>ONE Homo sapiens alu
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| 2 |
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GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGA
|
| 3 |
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TCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACT
|
| 4 |
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AAAAATACAAAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTAATCCCAGCTACTCGGGAG
|
| 5 |
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GCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCG
|
| 6 |
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CCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAGGCCGGGCGCGGT
|
| 7 |
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GGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCTGAGGTCA
|
| 8 |
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GGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAA
|
| 9 |
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TTAGCCGGGCGTGGTGGCGCGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAG
|
| 10 |
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AATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCA
|
| 11 |
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GCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAGGCCGGGCGCGGTGGCTCACGCCTGT
|
| 12 |
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AATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCTGAGGTCAGGAGTTCGAGACC
|
| 13 |
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AGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTG
|
| 14 |
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GTGGCGCGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACC
|
| 15 |
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CGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAG
|
| 16 |
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AGCGAGACTCCGTCTCAAAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTT
|
| 17 |
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TGGGAGGCCGAGGCGGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACA
|
| 18 |
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TGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGCGCGCCT
|
| 19 |
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GTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGG
|
| 20 |
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TTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGT
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| 21 |
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CTCAAAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGG
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| 22 |
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CGGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCG
|
| 23 |
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TCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTAATCCCAGCTA
|
| 24 |
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CTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCG
|
| 25 |
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AGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAGGCCG
|
| 26 |
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GGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACC
|
| 27 |
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|
TGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAA
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| 28 |
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TACAAAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTAATCCCAGCTACTCGGGAGGCTGA
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| 29 |
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GGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACT
|
| 30 |
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GCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAGGCCGGGCGCGGTGGCTC
|
| 31 |
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ACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCTGAGGTCAGGAGT
|
| 32 |
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TCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGC
|
| 33 |
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|
CGGGCGTGGTGGCGCGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCG
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| 34 |
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CTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTG
|
| 35 |
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GGCGACAGAGCGAGACTCCG
|
| 36 |
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|
>TWO IUB ambiguity codes
|
| 37 |
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cttBtatcatatgctaKggNcataaaSatgtaaaDcDRtBggDtctttataattcBgtcg
|
| 38 |
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tactDtDagcctatttSVHtHttKtgtHMaSattgWaHKHttttagacatWatgtRgaaa
|
| 39 |
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|
NtactMcSMtYtcMgRtacttctWBacgaaatatagScDtttgaagacacatagtVgYgt
|
| 40 |
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|
cattHWtMMWcStgttaggKtSgaYaaccWStcgBttgcgaMttBYatcWtgacaYcaga
|
| 41 |
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gtaBDtRacttttcWatMttDBcatWtatcttactaBgaYtcttgttttttttYaaScYa
|
| 42 |
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HgtgttNtSatcMtcVaaaStccRcctDaataataStcYtRDSaMtDttgttSagtRRca
|
| 43 |
|
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tttHatSttMtWgtcgtatSSagactYaaattcaMtWatttaSgYttaRgKaRtccactt
|
| 44 |
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tattRggaMcDaWaWagttttgacatgttctacaaaRaatataataaMttcgDacgaSSt
|
| 45 |
|
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acaStYRctVaNMtMgtaggcKatcttttattaaaaagVWaHKYagtttttatttaacct
|
| 46 |
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tacgtVtcVaattVMBcttaMtttaStgacttagattWWacVtgWYagWVRctDattBYt
|
| 47 |
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gtttaagaagattattgacVatMaacattVctgtBSgaVtgWWggaKHaatKWcBScSWa
|
| 48 |
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|
accRVacacaaactaccScattRatatKVtactatatttHttaagtttSKtRtacaaagt
|
| 49 |
|
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RDttcaaaaWgcacatWaDgtDKacgaacaattacaRNWaatHtttStgttattaaMtgt
|
| 50 |
|
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tgDcgtMgcatBtgcttcgcgaDWgagctgcgaggggVtaaScNatttacttaatgacag
|
| 51 |
|
|
cccccacatYScaMgtaggtYaNgttctgaMaacNaMRaacaaacaKctacatagYWctg
|
| 52 |
|
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ttWaaataaaataRattagHacacaagcgKatacBttRttaagtatttccgatctHSaat
|
| 53 |
|
|
actcNttMaagtattMtgRtgaMgcataatHcMtaBSaRattagttgatHtMttaaKagg
|
| 54 |
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YtaaBataSaVatactWtataVWgKgttaaaacagtgcgRatatacatVtHRtVYataSa
|
| 55 |
|
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KtWaStVcNKHKttactatccctcatgWHatWaRcttactaggatctataDtDHBttata
|
| 56 |
|
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aaaHgtacVtagaYttYaKcctattcttcttaataNDaaggaaaDYgcggctaaWSctBa
|
| 57 |
|
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aNtgctggMBaKctaMVKagBaactaWaDaMaccYVtNtaHtVWtKgRtcaaNtYaNacg
|
| 58 |
|
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gtttNattgVtttctgtBaWgtaattcaagtcaVWtactNggattctttaYtaaagccgc
|
| 59 |
|
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tcttagHVggaYtgtNcDaVagctctctKgacgtatagYcctRYHDtgBattDaaDgccK
|
| 60 |
|
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tcHaaStttMcctagtattgcRgWBaVatHaaaataYtgtttagMDMRtaataaggatMt
|
| 61 |
|
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ttctWgtNtgtgaaaaMaatatRtttMtDgHHtgtcattttcWattRSHcVagaagtacg
|
| 62 |
|
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ggtaKVattKYagactNaatgtttgKMMgYNtcccgSKttctaStatatNVataYHgtNa
|
| 63 |
|
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BKRgNacaactgatttcctttaNcgatttctctataScaHtataRagtcRVttacDSDtt
|
| 64 |
|
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aRtSatacHgtSKacYagttMHtWataggatgactNtatSaNctataVtttRNKtgRacc
|
| 65 |
|
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tttYtatgttactttttcctttaaacatacaHactMacacggtWataMtBVacRaSaatc
|
| 66 |
|
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cgtaBVttccagccBcttaRKtgtgcctttttRtgtcagcRttKtaaacKtaaatctcac
|
| 67 |
|
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aattgcaNtSBaaccgggttattaaBcKatDagttactcttcattVtttHaaggctKKga
|
| 68 |
|
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tacatcBggScagtVcacattttgaHaDSgHatRMaHWggtatatRgccDttcgtatcga
|
| 69 |
|
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aacaHtaagttaRatgaVacttagattVKtaaYttaaatcaNatccRttRRaMScNaaaD
|
| 70 |
|
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gttVHWgtcHaaHgacVaWtgttScactaagSgttatcttagggDtaccagWattWtRtg
|
| 71 |
|
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ttHWHacgattBtgVcaYatcggttgagKcWtKKcaVtgaYgWctgYggVctgtHgaNcV
|
| 72 |
|
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taBtWaaYatcDRaaRtSctgaHaYRttagatMatgcatttNattaDttaattgttctaa
|
| 73 |
|
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ccctcccctagaWBtttHtBccttagaVaatMcBHagaVcWcagBVttcBtaYMccagat
|
| 74 |
|
|
gaaaaHctctaacgttagNWRtcggattNatcRaNHttcagtKttttgWatWttcSaNgg
|
| 75 |
|
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gaWtactKKMaacatKatacNattgctWtatctaVgagctatgtRaHtYcWcttagccaa
|
| 76 |
|
|
tYttWttaWSSttaHcaaaaagVacVgtaVaRMgattaVcDactttcHHggHRtgNcctt
|
| 77 |
|
|
tYatcatKgctcctctatVcaaaaKaaaagtatatctgMtWtaaaacaStttMtcgactt
|
| 78 |
|
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taSatcgDataaactaaacaagtaaVctaggaSccaatMVtaaSKNVattttgHccatca
|
| 79 |
|
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cBVctgcaVatVttRtactgtVcaattHgtaaattaaattttYtatattaaRSgYtgBag
|
| 80 |
|
|
aHSBDgtagcacRHtYcBgtcacttacactaYcgctWtattgSHtSatcataaatataHt
|
| 81 |
|
|
cgtYaaMNgBaatttaRgaMaatatttBtttaaaHHKaatctgatWatYaacttMctctt
|
| 82 |
|
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ttVctagctDaaagtaVaKaKRtaacBgtatccaaccactHHaagaagaaggaNaaatBW
|
| 83 |
|
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attccgStaMSaMatBttgcatgRSacgttVVtaaDMtcSgVatWcaSatcttttVatag
|
| 84 |
|
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ttactttacgatcaccNtaDVgSRcgVcgtgaacgaNtaNatatagtHtMgtHcMtagaa
|
| 85 |
|
|
attBgtataRaaaacaYKgtRccYtatgaagtaataKgtaaMttgaaRVatgcagaKStc
|
| 86 |
|
|
tHNaaatctBBtcttaYaBWHgtVtgacagcaRcataWctcaBcYacYgatDgtDHccta
|
| 87 |
|
|
>THREE Homo sapiens frequency
|
| 88 |
|
|
aacacttcaccaggtatcgtgaaggctcaagattacccagagaacctttgcaatataaga
|
| 89 |
|
|
atatgtatgcagcattaccctaagtaattatattctttttctgactcaaagtgacaagcc
|
| 90 |
|
|
ctagtgtatattaaatcggtatatttgggaaattcctcaaactatcctaatcaggtagcc
|
| 91 |
|
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atgaaagtgatcaaaaaagttcgtacttataccatacatgaattctggccaagtaaaaaa
|
| 92 |
|
|
tagattgcgcaaaattcgtaccttaagtctctcgccaagatattaggatcctattactca
|
| 93 |
|
|
tatcgtgtttttctttattgccgccatccccggagtatctcacccatccttctcttaaag
|
| 94 |
|
|
gcctaatattacctatgcaaataaacatatattgttgaaaattgagaacctgatcgtgat
|
| 95 |
|
|
tcttatgtgtaccatatgtatagtaatcacgcgactatatagtgctttagtatcgcccgt
|
| 96 |
|
|
gggtgagtgaatattctgggctagcgtgagatagtttcttgtcctaatatttttcagatc
|
| 97 |
|
|
gaatagcttctatttttgtgtttattgacatatgtcgaaactccttactcagtgaaagtc
|
| 98 |
|
|
atgaccagatccacgaacaatcttcggaatcagtctcgttttacggcggaatcttgagtc
|
| 99 |
|
|
taacttatatcccgtcgcttactttctaacaccccttatgtatttttaaaattacgttta
|
| 100 |
|
|
ttcgaacgtacttggcggaagcgttattttttgaagtaagttacattgggcagactcttg
|
| 101 |
|
|
acattttcgatacgactttctttcatccatcacaggactcgttcgtattgatatcagaag
|
| 102 |
|
|
ctcgtgatgattagttgtcttctttaccaatactttgaggcctattctgcgaaatttttg
|
| 103 |
|
|
ttgccctgcgaacttcacataccaaggaacacctcgcaacatgccttcatatccatcgtt
|
| 104 |
|
|
cattgtaattcttacacaatgaatcctaagtaattacatccctgcgtaaaagatggtagg
|
| 105 |
|
|
ggcactgaggatatattaccaagcatttagttatgagtaatcagcaatgtttcttgtatt
|
| 106 |
|
|
aagttctctaaaatagttacatcgtaatgttatctcgggttccgcgaataaacgagatag
|
| 107 |
|
|
attcattatatatggccctaagcaaaaacctcctcgtattctgttggtaattagaatcac
|
| 108 |
|
|
acaatacgggttgagatattaattatttgtagtacgaagagatataaaaagatgaacaat
|
| 109 |
|
|
tactcaagtcaagatgtatacgggatttataataaaaatcgggtagagatctgctttgca
|
| 110 |
|
|
attcagacgtgccactaaatcgtaatatgtcgcgttacatcagaaagggtaactattatt
|
| 111 |
|
|
aattaataaagggcttaatcactacatattagatcttatccgatagtcttatctattcgt
|
| 112 |
|
|
tgtatttttaagcggttctaattcagtcattatatcagtgctccgagttctttattattg
|
| 113 |
|
|
ttttaaggatgacaaaatgcctcttgttataacgctgggagaagcagactaagagtcgga
|
| 114 |
|
|
gcagttggtagaatgaggctgcaaaagacggtctcgacgaatggacagactttactaaac
|
| 115 |
|
|
caatgaaagacagaagtagagcaaagtctgaagtggtatcagcttaattatgacaaccct
|
| 116 |
|
|
taatacttccctttcgccgaatactggcgtggaaaggttttaaaagtcgaagtagttaga
|
| 117 |
|
|
ggcatctctcgctcataaataggtagactactcgcaatccaatgtgactatgtaatactg
|
| 118 |
|
|
ggaacatcagtccgcgatgcagcgtgtttatcaaccgtccccactcgcctggggagacat
|
| 119 |
|
|
gagaccacccccgtggggattattagtccgcagtaatcgactcttgacaatccttttcga
|
| 120 |
|
|
ttatgtcatagcaatttacgacagttcagcgaagtgactactcggcgaaatggtattact
|
| 121 |
|
|
aaagcattcgaacccacatgaatgtgattcttggcaatttctaatccactaaagcttttc
|
| 122 |
|
|
cgttgaatctggttgtagatatttatataagttcactaattaagatcacggtagtatatt
|
| 123 |
|
|
gatagtgatgtctttgcaagaggttggccgaggaatttacggattctctattgatacaat
|
| 124 |
|
|
ttgtctggcttataactcttaaggctgaaccaggcgtttttagacgacttgatcagctgt
|
| 125 |
|
|
tagaatggtttggactccctctttcatgtcagtaacatttcagccgttattgttacgata
|
| 126 |
|
|
tgcttgaacaatattgatctaccacacacccatagtatattttataggtcatgctgttac
|
| 127 |
|
|
ctacgagcatggtattccacttcccattcaatgagtattcaacatcactagcctcagaga
|
| 128 |
|
|
tgatgacccacctctaataacgtcacgttgcggccatgtgaaacctgaacttgagtagac
|
| 129 |
|
|
gatatcaagcgctttaaattgcatataacatttgagggtaaagctaagcggatgctttat
|
| 130 |
|
|
ataatcaatactcaataataagatttgattgcattttagagttatgacacgacatagttc
|
| 131 |
|
|
actaacgagttactattcccagatctagactgaagtactgatcgagacgatccttacgtc
|
| 132 |
|
|
gatgatcgttagttatcgacttaggtcgggtctctagcggtattggtacttaaccggaca
|
| 133 |
|
|
ctatactaataacccatgatcaaagcataacagaatacagacgataatttcgccaacata
|
| 134 |
|
|
tatgtacagaccccaagcatgagaagctcattgaaagctatcattgaagtcccgctcaca
|
| 135 |
|
|
atgtgtcttttccagacggtttaactggttcccgggagtcctggagtttcgacttacata
|
| 136 |
|
|
aatggaaacaatgtattttgctaatttatctatagcgtcatttggaccaatacagaatat
|
| 137 |
|
|
tatgttgcctagtaatccactataacccgcaagtgctgatagaaaatttttagacgattt
|
| 138 |
|
|
ataaatgccccaagtatccctcccgtgaatcctccgttatactaattagtattcgttcat
|
| 139 |
|
|
acgtataccgcgcatatatgaacatttggcgataaggcgcgtgaattgttacgtgacaga
|
| 140 |
|
|
gatagcagtttcttgtgatatggttaacagacgtacatgaagggaaactttatatctata
|
| 141 |
|
|
gtgatgcttccgtagaaataccgccactggtctgccaatgatgaagtatgtagctttagg
|
| 142 |
|
|
tttgtactatgaggctttcgtttgtttgcagagtataacagttgcgagtgaaaaaccgac
|
| 143 |
|
|
gaatttatactaatacgctttcactattggctacaaaatagggaagagtttcaatcatga
|
| 144 |
|
|
gagggagtatatggatgctttgtagctaaaggtagaacgtatgtatatgctgccgttcat
|
| 145 |
|
|
tcttgaaagatacataagcgataagttacgacaattataagcaacatccctaccttcgta
|
| 146 |
|
|
acgatttcactgttactgcgcttgaaatacactatggggctattggcggagagaagcaga
|
| 147 |
|
|
tcgcgccgagcatatacgagacctataatgttgatgatagagaaggcgtctgaattgata
|
| 148 |
|
|
catcgaagtacactttctttcgtagtatctctcgtcctctttctatctccggacacaaga
|
| 149 |
|
|
attaagttatatatatagagtcttaccaatcatgttgaatcctgattctcagagttcttt
|
| 150 |
|
|
ggcgggccttgtgatgactgagaaacaatgcaatattgctccaaatttcctaagcaaatt
|
| 151 |
|
|
ctcggttatgttatgttatcagcaaagcgttacgttatgttatttaaatctggaatgacg
|
| 152 |
|
|
gagcgaagttcttatgtcggtgtgggaataattcttttgaagacagcactccttaaataa
|
| 153 |
|
|
tatcgctccgtgtttgtatttatcgaatgggtctgtaaccttgcacaagcaaatcggtgg
|
| 154 |
|
|
tgtatatatcggataacaattaatacgatgttcatagtgacagtatactgatcgagtcct
|
| 155 |
|
|
ctaaagtcaattacctcacttaacaatctcattgatgttgtgtcattcccggtatcgccc
|
| 156 |
|
|
gtagtatgtgctctgattgaccgagtgtgaaccaaggaacatctactaatgcctttgtta
|
| 157 |
|
|
ggtaagatctctctgaattccttcgtgccaacttaaaacattatcaaaatttcttctact
|
| 158 |
|
|
tggattaactacttttacgagcatggcaaattcccctgtggaagacggttcattattatc
|
| 159 |
|
|
ggaaaccttatagaaattgcgtgttgactgaaattagatttttattgtaagagttgcatc
|
| 160 |
|
|
tttgcgattcctctggtctagcttccaatgaacagtcctcccttctattcgacatcgggt
|
| 161 |
|
|
ccttcgtacatgtctttgcgatgtaataattaggttcggagtgtggccttaatgggtgca
|
| 162 |
|
|
actaggaatacaacgcaaatttgctgacatgatagcaaatcggtatgccggcaccaaaac
|
| 163 |
|
|
gtgctccttgcttagcttgtgaatgagactcagtagttaaataaatccatatctgcaatc
|
| 164 |
|
|
gattccacaggtattgtccactatctttgaactactctaagagatacaagcttagctgag
|
| 165 |
|
|
accgaggtgtatatgactacgctgatatctgtaaggtaccaatgcaggcaaagtatgcga
|
| 166 |
|
|
gaagctaataccggctgtttccagctttataagattaaaatttggctgtcctggcggcct
|
| 167 |
|
|
cagaattgttctatcgtaatcagttggttcattaattagctaagtacgaggtacaactta
|
| 168 |
|
|
tctgtcccagaacagctccacaagtttttttacagccgaaacccctgtgtgaatcttaat
|
| 169 |
|
|
atccaagcgcgttatctgattagagtttacaactcagtattttatcagtacgttttgttt
|
| 170 |
|
|
ccaacattacccggtatgacaaaatgacgccacgtgtcgaataatggtctgaccaatgta
|
| 171 |
|
|
ggaagtgaaaagataaatat
|
