DNA Sequence Alignment Accelerator
Project maintainers
Details
Name: seqalign
Created: Aug 17, 2009
Updated: Aug 17, 2009
SVN Updated: Aug 17, 2009
SVN: Browse
Latest version: download (might take a bit to start...)
Statistics: View
Bugs: 0 reported / 0 solved
Created: Aug 17, 2009
Updated: Aug 17, 2009
SVN Updated: Aug 17, 2009
SVN: Browse
Latest version: download (might take a bit to start...)
Statistics: View
Bugs: 0 reported / 0 solved
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Other project properties
Category:Other
Language:Verilog
Development status:Alpha
Additional info:
WishBone compliant: No
WishBone version: n/a
License: LGPL
Language:Verilog
Development status:Alpha
Additional info:
WishBone compliant: No
WishBone version: n/a
License: LGPL
Description
This is an easily configurable systolic array of processors to compute the optimal alignment between two DNA sequences. It supports affine gap penalties, and is configurable between local (smith-waterman) and global (needleman-wunsch) alignment algorithms by setting an internal register. All code is in Verilog.
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